Structure based multiple sequence alignment (SB-MSA)
3DM uses a structure based MSA to connect the proteins of a superfamily. Via the alignment it is possible to transfer residue and alignment data to other proteins or structures.
In the alignment viewer you can view and analyse this alignment.
By default, a superfamily alignment only shows the consensus of each alignment subfamily. A subfamily is usually based on a protein structure and connected to other alignment subfamilies via the structural alignment.
The consensus can be expanded to view the protein sequences present in a subfamily.
Only available in consensus view.
Show or hide first 15 proteins of all subfamilies.